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Deep Learning
DeepLC can predict retention times for peptides that carry as-yet unseen modifications
The inclusion of peptide retention time prediction promises to remove peptide identification ambiguity in complex liquid …
Robbin Bouwmeester
,
Ralf Gabriels
,
Niels Hulstaert
,
Lennart Martens
,
Sven Degroeve
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DOI
Spectral prediction features as a solution for the search space size problem in proteogenomics
Proteogenomics approaches often struggle with the distinction between true and false peptide-to-spectrum matches as the database size …
Steven Verbruggen
,
Siegfried Gessulat
,
Ralf Gabriels
,
Anna Matsaroki
,
Hendrik Van de Voorde
,
Bernhard Kuster
,
Sven Degroeve
,
Lennart Martens
,
Wim Van Criekinge
,
Mathias Wilhelm
,
Gerben Menschaert
DOI
The Age of Data-Driven Proteomics: How Machine Learning Enables Novel Workflows
A lot of energy in the field of proteomics is dedicated to the application of challenging experimental workflows, which include …
Robbin Bouwmeester
,
Ralf Gabriels
,
Tim Van Den Bossche
,
Lennart Martens
,
Sven Degroeve
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